Generalizable Framework for Atrial Volume Estimation for Cardiac CT Images Using Deep Learning With Quality Control Assessment. (Record no. 787)

MARC details
000 -LEADER
fixed length control field 03227nam a22003617a 4500
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fixed length control field 220222s20222022 xxu||||| |||| 00| 0 eng d
024 ## - OTHER STANDARD IDENTIFIER
Standard number or code 10.3389/fcvm.2022.822269 [doi]
024 ## - OTHER STANDARD IDENTIFIER
Standard number or code PMC8831539 [pmc]
040 ## - CATALOGING SOURCE
Original cataloging agency Ovid MEDLINE(R)
099 ## - LOCAL FREE-TEXT CALL NUMBER (OCLC)
PMID 35155637
245 ## - TITLE STATEMENT
Title Generalizable Framework for Atrial Volume Estimation for Cardiac CT Images Using Deep Learning With Quality Control Assessment.
251 ## - Source
Source Frontiers in Cardiovascular Medicine. 9:822269, 2022.
252 ## - Abbreviated Source
Abbreviated source Front. cardiovasc. med.. 9:822269, 2022.
253 ## - Journal Name
Journal name Frontiers in cardiovascular medicine
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Year 2022
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Manufacturer FY2022
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Publication status epublish
266 ## - Date added to catalog
Date added to catalog 2022-02-22
520 ## - SUMMARY, ETC.
Abstract Conclusions: We proposed a generalizable framework that consists of DL models and computational methods for LAV estimation. The framework provides an efficient and robust strategy for QC assessment of the accuracy for DL-based image segmentation and volume estimation tasks, allowing high-throughput extraction of reproducible LAV measurements to be possible. Copyright (c) 2022 Abdulkareem, Brahier, Zou, Taylor, Thomaides, Bergquist, Srichai, Lee, Vargas and Petersen.
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Abstract Methods: Using a dataset of 85,477 CCT images from 337 patients, we proposed a framework that consists of several processes that perform a combination of tasks including the selection of images with LA from all other images using a ResNet50 classification model, the segmentation of images with LA using a UNet image segmentation model, the assessment of the quality of the image segmentation task, the estimation of LAV, and quality control (QC) assessment.
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Abstract Objectives: Cardiac computed tomography (CCT) is a common pre-operative imaging modality to evaluate pulmonary vein anatomy and left atrial appendage thrombus in patients undergoing catheter ablation (CA) for atrial fibrillation (AF). These images also allow for full volumetric left atrium (LA) measurement for recurrence risk stratification, as larger LA volume (LAV) is associated with higher recurrence rates. Our objective is to apply deep learning (DL) techniques to fully automate the computation of LAV and assess the quality of the computed LAV values.
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Abstract Results: Overall, the proposed LAV estimation framework achieved accuracies of 98% (precision, recall, and F1 score metrics) in the image classification task, 88.5% (mean dice score) in the image segmentation task, 82% (mean dice score) in the segmentation quality prediction task, and R 2 (the coefficient of determination) value of 0.968 in the volume estimation task. It correctly identified 9 out of 10 poor LAV estimations from a total of 337 patients as poor-quality estimates.
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Language note English
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Topical term or geographic name entry element IN PROCESS -- NOT YET INDEXED
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Institution MedStar Heart & Vascular Institute
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Medline publication type Journal Article
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Local Authors Bergquist, Peter J
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Local Authors Srichai, Monvadi B
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Local Authors Thomaides, Athanasios
790 ## - Authors
All authors Abdulkareem M, Bergquist PJ, Brahier MS, Lee AM, Petersen SE, Srichai MB, Taylor A, Thomaides A, Vargas JD, Zou F
856 ## - ELECTRONIC LOCATION AND ACCESS
DOI <a href="https://dx.doi.org/10.3389/fcvm.2022.822269">https://dx.doi.org/10.3389/fcvm.2022.822269</a>
Public note https://dx.doi.org/10.3389/fcvm.2022.822269
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Journal Article
Item type description Article
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          MedStar Authors Catalog MedStar Authors Catalog 02/22/2022   35155637 35155637 02/22/2022 02/22/2022 Journal Article

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